miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|159620143|gb|EG397209.1|EG397209 AGGATGAATGTGCATTGCTCTCTAGACGGCNNNNTTCTGAATACCCTGTTCGAAATATGTTCAAACTCTTTATATGTGCT
ATTTGTCAAGTAGAGTTAAAGCCAAATCAAGGGATATCTGTACATGAAGATTCATCACAACCTGGGAACTTGCGTCGATG
GGATGGTCCGTTCCTTTGCCAGAGCTGTCAGGAAAAAAAAGAAGCCATGGAGGGAAAGCGCCGTTCACGAGGTATTGTTT
GCAGAGCTGTTTATATACTACTTGTTACTCCCTCTGTTCCACAATGTAGTGCATATTTGATTTTTAATAAGTCAAACAAG
TCTACGTTTGAGCAAGATTGTAGGGAAAATATCAACATCTAAAATCCAAAACTAGTATCATTAGATTCATCATGAAGTCT
ATTTTCATATTTTAAATATTTACTCCCTCTGTCTCATAATATAAGACGTTTTTAGTAGTATTTTAGATGCTGATAGTTTA
TTCTATAAACTTGGTCAAACGTAGACATGTTTGACTTTCTAAAAACCAAATATGCACCACATTGTGAAATGGAGGGAGTA
TGAAGTACCGAAACCTTTTCCTTATATATTGTTAACTTGCTCCAGATTCGTCATCGAGAAATAGCAGGTTCAGTGAATAG
TTGCC




Most similar to sp|Q6YTI2|P2C15_ORYSJ

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q6YTI2|P2C15_ORYSJ Probable protein phosphatase 2C 15 OS=Oryza
           sativa subsp. japonica GN=Os02g0567200 PE=2 SV=1
          Length = 442

 Score =  149 bits (375), Expect = 2e-35
 Identities = 69/76 (90%), Positives = 71/76 (93%)
 Frame = +3

Query: 3   DECALLSRRXXSEYPVRNMFKLFICAICQVELKPNQGISVHEDSSQPGNLRRWDGPFLCQ 182
           D CA LS+R  SEYPVRNMFKLFICAICQVELKP+QGISVHEDSSQPGNLRRWDGPFLCQ
Sbjct: 356 DGCAFLSKRLDSEYPVRNMFKLFICAICQVELKPSQGISVHEDSSQPGNLRRWDGPFLCQ 415

Query: 183 SCQEKKEAMEGKRRSR 230
            CQEKKEAMEGKRRSR
Sbjct: 416 GCQEKKEAMEGKRRSR 431